Projects

Understanding how mutations common in a childhood cancer (neuroblastoma) distort differentiation and drive cells to cause tumours

1 article, Bioinformatic single-cell transcriptomics analysis of cell differentiation, validation in vivo, clinical relevance)

Understanding how SARS-Cov-2 mutations alter the interaction with cytotoxic T cells

1 article, Bioinformatic analysis of T cell immune responses in vitro

Understanding how yeast process glucose signals that change over time 

1 article, 1 preprint and PhD thesis. Microfluidics, time lapse microscopy, image analysis, mathematical modeling, MATLAB

A software that helps scientists organise and analyse plate reader data using data science tools

2 articles. Python (pandas), Gaussian processes, plate reader data

Using machine learning to understand relationships between proteins sitting on mitotic chromosomes

2 articles. Machine learning, bioinformatics, mitosis, proteomics.

Simulating the heterogeneity of bacterial infections via an interactive mannequin game.